EST-derived single nucleotide polymorphism markers for assembling genetic and physical map of the barley genome
| dc.contributor.author | Kota, R. | |
| dc.contributor.author | Varshney, R. K. | |
| dc.contributor.author | Prasad, M. | |
| dc.contributor.author | Zhang, H. | |
| dc.contributor.author | Stein, N. | |
| dc.contributor.author | Graner, A. | |
| dc.date.AcceptedDate | 15 September 2007 | en_US |
| dc.date.accessioned | 2013-11-07T10:43:33Z | |
| dc.date.available | 2013-11-07T10:43:33Z | |
| dc.date.issued | 2008 | |
| dc.description.abstract | In a panel of seven genotypes, 437 expressed sequence tag (EST)-derived DNA fragments were sequenced. Single nucleotide polymorphisms (SNPs) that were polymorphic between the parents of three mapping populations were mapped by heteroduplex analysis and a genome-wide consensus map comprising 216 EST-derived SNPs and 4 InDel (insertion/deletion) markers was constructed. The average frequency of SNPs amounted to 1/130 bp and 1/107.8 bp for a set of randomly selected and a set of mapped ESTs, respectively. | en_US |
| dc.identifier.citation | Funct. Integr. Genomics, 8: 223-233 | en_US |
| dc.identifier.uri | http://hdl.handle.net/123456789/90 | |
| dc.language.iso | en | en_US |
| dc.publisher | Springer | en_US |
| dc.subject | Molecular markers | en_US |
| dc.subject | SNPs | en_US |
| dc.subject | Haplotype diversity | en_US |
| dc.subject | Nucleotide diversity | en_US |
| dc.subject | Genetic map | en_US |
| dc.title | EST-derived single nucleotide polymorphism markers for assembling genetic and physical map of the barley genome | en_US |
| dc.type | Article | en_US |