Transcriptome profiling for discovery of genes involved in shoot apical meristem and flower development
| dc.contributor.author | Singh, Vikash K. | |
| dc.contributor.author | Jain, Mukesh | |
| dc.date.accessioned | 2015-12-29T10:07:40Z | |
| dc.date.available | 2015-12-29T10:07:40Z | |
| dc.date.issued | 2014 | |
| dc.description | Accepted date: 4 June 2014 | en_US |
| dc.description.abstract | Flower development is one of the major developmental processes that governs seed setting in angiosperms. However, little is known about the molecular mechanisms underlying flower development in legumes. Employing RNA-seq for various stages of flower development and few vegetative tissues in chickpea, we identified differentially expressed genes in flower tissues/stages in comparison to vegetative tissues, which are related to various biological processes and molecular functions during flower development. Here, we provide details of experimental methods, RNA-seq data (available at Gene Expression Omnibus database under GSE42679) and analysis pipeline published by Singh and colleagues in the Plant Biotechnology Journal (Singh et al., 2013), along with additional analysis for discovery of genes involved in shoot apical meristem (SAM) development. Our data provide a resource for exploring the complex molecular mechanisms underlying SAM and flower development and identification of gene targets for functional and applied genomics in legumes. | en_US |
| dc.description.sponsorship | This work was funded by the Department of Biotechnology, Government of India, under the Next Generation Challenge Programme on Chickpea Genomics (grant number BT/PR12919/AGR/02/676/2009 from 2009 to 2014). VKS acknowledges the award of research fellowship from the Department of Biotechnology, Government of India. | en_US |
| dc.identifier.citation | Genomics Data, 2: 135-138 | en_US |
| dc.identifier.doi | 10.1016/j.gdata.2014.06.004 | en_US |
| dc.identifier.issn | 2213-5960 | |
| dc.identifier.officialurl | http://www.sciencedirect.com/science/article/pii/S2213596014000373 | en_US |
| dc.identifier.uri | http://172.16.0.77:8080/jspui/handle/123456789/466 | |
| dc.language.iso | en_US | en_US |
| dc.publisher | Elsevier B.V. | en_US |
| dc.subject | Shoot apical meristem | en_US |
| dc.subject | Flower development | en_US |
| dc.subject | Chickpea | en_US |
| dc.subject | RNA-seq | en_US |
| dc.subject | Differential expression | en_US |
| dc.title | Transcriptome profiling for discovery of genes involved in shoot apical meristem and flower development | en_US |
| dc.type | Article | en_US |