Cloning, expression, purification and crystallization of a novel GlcNAc metabolic protein, gig2 (duf1479) from pathogenic fungus Candida albicans

dc.contributor.authorRani, Priya
dc.contributor.authorGautam, Gunjan
dc.contributor.authorRao, Kongara Hanumantha
dc.contributor.authorGhosh, Swagata
dc.contributor.authorGourinath, Samudrala
dc.contributor.authorDhar, Suman Kumar
dc.contributor.authorDatta, Asis
dc.date.accessioned2018-06-25T08:13:11Z
dc.date.available2018-06-25T08:13:11Z
dc.date.issued2017
dc.descriptionAccepted date: June 21, 2017en_US
dc.description.abstractN-acetylglucosamine (GlcNAc), an alternative sugar, is emerging as an important molecule having a multifarious role in Candida albicans including a major role in signaling. GlcNAc Inducible Gene 2, GIG2 is one of the highly upregulated genes in GlcNAc grown cells in C. albicans. Our earlier studies show the involvement of Gig2 in the formation of N-acetylneuraminic (NANA) acid from GlcNAc-6-phosphate through an understudied route. The crystal structure of Gig2 would help us in determining the exact reaction that this enzyme catalyzes. Here the cloning, expression, purification and crystallization of this protein are reported along with preliminary X-ray crystallographic analysis at 2.4Å resolution. The crystal belonged to P2 1 space group, with unit cell parameters a=59.59, b= 54.43, c= 73.29Å; α = 90°, β = 102.7° and γ = 90°. The structure was solved using PDB ID 2CSG as a template which has only 27% identity. Molecular replacement yielded a solution with LLG score of 87. The structure is currently under further refinement.en_US
dc.description.sponsorshipWe thank Science and Engineering Research Board (SERB), Department of Science and Technology (DST), Government of India for funding. We thank UGC-RNW, UGC-SAP, UGCUPOE-II, DST-FIST, and DST-PURSE for funding central instrumentation facility and for extending institutional funding. PR and GG thank UGC and CSIR for fellowship. We also thank Department of Biotechnology (DBT) and staffs of BM14, ESRF for helping us with the collection of high-resolution X-ray data.en_US
dc.identifier.citationJournal of Proteins and Proteomics 8(2): 127-132en_US
dc.identifier.issn0975-8151
dc.identifier.officialurlhttp://jpp.org.in/index.php/jpp/article/view/229en_US
dc.identifier.urihttps://ndkr-library.nipgr.ac.in/handle/123456789/865
dc.language.isoen_USen_US
dc.publisherProteomics Society, India (PSI)en_US
dc.subjectN-acetylglucosamine (GlcNAc)en_US
dc.subjectGlcNAc Inducible Gene 2 (GIG2)en_US
dc.subjectDUF (Domains of Unknown Function) family of proteinsen_US
dc.subjectCrystallographyen_US
dc.titleCloning, expression, purification and crystallization of a novel GlcNAc metabolic protein, gig2 (duf1479) from pathogenic fungus Candida albicansen_US
dc.typeArticleen_US

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