Genome-wide characterization and comparative analysis of the OSCA gene family and identification of its potential stress-responsive members in legumes

dc.contributor.authorChakraborty, Srija
dc.contributor.authorGangwar, Rashmi
dc.contributor.authorZahra, Shafaque
dc.contributor.authorPoddar, Nikita
dc.contributor.authorSingh, Amarjeet
dc.contributor.authorKumar, Shailesh
dc.date.accessioned2023-04-19T07:16:16Z
dc.date.available2023-04-19T07:16:16Z
dc.date.issued2023
dc.descriptionAccepted date: 10 April 2023en_US
dc.description.abstractCicer arietinum, Cajanus cajan, Vigna radiata, and Phaseolus vulgaris are economically important legume crops with high nutritional value. They are negatively impacted globally by different biotic and abiotic stresses. Hyperosmolality-gated calcium-permeable channels (OSCA) have been characterized as osmosensors in Arabidopsis thaliana but have not previously reported in legumes. This study provides a genome-wide identification, characterization, and comparative analysis of OSCA genes in legumes. Our study identified and characterized 13 OSCA genes in C. cajan, V. radiata, P. vulgaris, and 12 in C. arietinum, classified into four distinct clades. We found evidence to suggest that the OSCAs might be involved in the interaction between hormone signalling pathways and stress signalling pathways. Furthermore, they play a major role in plant growth and development. The expression levels of the OSCAs vary under different stress conditions in a tissue-specific manner. Our study can be used to develop a detailed understanding of stress regulatory mechanisms of the OSCA gene family in legumes.en_US
dc.description.sponsorshipSZ thanks the Council of Scientifc and Industrial Research (CSIR), India for research fellowships. DBT (Department of Biotechnology)-eLibrary Consortium (DeLCON), is acknowledged for providing e-resources. SK acknowledges the BT/PR40146/BTIS/137/4/2020 project grant from the Department of Biotechnology (DBT), Government of India. Te authors acknowledge the Computational Biology & Bioinformatics Facility (CBBF) of the National Institute of Plant Genome Research (NIPGR).en_US
dc.identifier.citationScientific Reports, 13(1): 5914en_US
dc.identifier.issn2045-2322
dc.identifier.otherhttps://doi.org/10.1038/s41598-023-33226-8
dc.identifier.urihttps://www.nature.com/articles/s41598-023-33226-8
dc.identifier.urihttps://ndkr-library.nipgr.ac.in/handle/123456789/1464
dc.language.isoen_USen_US
dc.publisherNature Publishing Groupen_US
dc.subjectBioinformaticsen_US
dc.subjectData miningen_US
dc.subjectData processingen_US
dc.subjectGene expressionen_US
dc.subjectGene regulationen_US
dc.titleGenome-wide characterization and comparative analysis of the OSCA gene family and identification of its potential stress-responsive members in legumesen_US
dc.typeArticleen_US

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