Publications of NIPGR Scientists

Permanent URI for this communityhttps://ndkr-library.nipgr.ac.in/handle/123456789/1

Browse

Has files: YesSubject: search.filters.subject.MAPK

Search Results

Now showing 1 - 8 of 8
  • Thumbnail Image
    Item
    Development of efficient protocol for rice transformation overexpressing MAP kinase and their effect on root phenotypic traits
    (Springer Nature, 2019) Singh, Pallavi; Ara, Hussain; Tayyeba, Sumaira; Pandey, Chandana; Sinha, Alok Krishna
    Exhaustive studies on mitogen-activated protein kinase (MAPK) have reported the importance in regulating a variety of responses during plant growth and development. In particular, the potential MAPK genes, MPK3 and MPK6, seem to regulate a plethora of responses, conferring tolerance to varied abiotic, biotic, and developmental stimuli. This makes both MPK3 and MPK6 potential targets for further studies. It would be an important concern to overexpress and knock out these pivotal proteins and then, in turn, to monitor the plant response which is expected to correlate action of a gene to a trait in cellular and organismal contexts. However, overexpression of MAPK genes has remained a puzzle in plants. In the present study, we report the generation of stable transgenic lines overexpressing OsMPK3 in indica and japonica cultivars and OsMPK6 in japonica cultivar under the control of an inducible promoter. We also establish the crucial steps and troubleshooting for each of the indicated rice transformation medium components. Later, we study the potential role of these MAPKs in high-throughput analysis of root system architectural (RSA) traits. It was observed that OsMPK6 overexpression lines had a more robust and spread out root architectural system while OsMPK3 overexpression lines had a typical bushy phenotype.
  • Thumbnail Image
    Item
    Differential expression of Mitogen Activated Protein Kinase (MAPK) cascade components post submergence in Oryza sativa ssp indica cv Pusa Basmati 1
    (Taylor & Francis Group, 2016) Singh, Pallavi; Sinha, Alok Krishna
    Mitogen-activated protein kinase (MAPK) signaling cascade has been extensively studied in plants. Recently, this important network has been implicated in imparting submergence tolerance by facilitating the phosphorylation of the SUB1A1 protein. In this study, we try to examine the speculative role of MAPK cascade components in another rice mega-variety Pusa Basmati 1. The study reports that potential MAPK cascade components are triggered by submergence stress. Overall, the results provide a brief understanding of activation of MAPK cascade components post submergence stress in a rice variety, which does not harbor the Sub1A1, and in turn, succumbs to prolonged submergence stress.
  • Thumbnail Image
    Item
    A positive feedback loop governed by SUB1A1 interaction with Mitogen Activated Protein Kinase 3 imparts submergence tolerance in rice
    (American Society of Plant Biologists, 2016) Singh, Pallavi; Sinha, Alok Krishna
    Mitogen-activated protein kinase (MAPK) signal transduction networks have been extensively explored in plants; however, the connection between MAPK signalling cascades and submergence tolerance is currently unknown. The ethylene response factor-like protein SUB1A orchestrates a plethora of responses during submergence stress tolerance in rice. In the present study, we report that MPK3 is activated by submergence in a SUB1A-dependent manner. MPK3 physically interacts with and phosphorylates SUB1A in a tolerant-allele-specific manner. Furthermore, the tolerant allele SUB1A1 binds to the MPK3 promoter and regulates its expression in a positive regulatory loop during submergence stress signalling. We present molecular and physiological evidence for the key role of the MPK3-SUB1A1 module in acclimation of rice seedlings to the adverse effects of submergence. Overall, the results provide a mechanistic understanding of submergence tolerance in Oryza sativa.
  • Thumbnail Image
    Item
    Conscientiousness of mitogen activated protein kinases in acquiring tolerance for abiotic stresses in plants
    (Indian National Science Academy, 2014) Ara, H; Sinha, Alok Krishna
    Mitogen activated protein kinase (MAPK) is a conserved signalling cascade among eukaryotes. It is usually a three component signalling cascade comprising of a MAPK kinase kinase, a MAPK kinase and finally a MAPK connected to each other by an event of phosphorylation. All these three component are multigene family in plants. MAPK gets activated upon phosphorylation and in turn regulates variety of proteins both in cytosol and nucleus. MAPK are basically very sensitive enzyme and gets activated by a myriad of stimuli both biotic and abiotic. Besides sensing the stimuli, MAPKs have their role in development, senescence and other vital processes of a plant life. In the present review the role of MAP kinase in transducing abiotic stress signal have been discussed.
  • Thumbnail Image
    Item
    Rice mitogen activated protein kinase kinase and mitogen activated protein kinase interaction network revealed by in-silico docking and yeast two-hybrid approaches
    (PLOS, 2013) Wankhede, Dhammaprakash Pandhari; Misra, Mohit; Singh, Pallavi; Sinha, Alok Krishna
    Protein-protein interaction is one of the crucial ways to decipher the functions of proteins and to understand their role in complex pathways at cellular level. Such a protein-protein interaction network in many crop plants remains poorly defined owing largely to the involvement of high costs, requirement for state of the art laboratory, time and labour intensive techniques. Here, we employed computational docking using ZDOCK and RDOCK programmes to identify interaction network between members of Oryza sativa mitogen activated protein kinase kinase (MAPKK) and mitogen activated protein kinase (MAPK). The 3-dimentional (3-D) structures of five MAPKKs and eleven MAPKs were determined by homology modelling and were further used as input for docking studies. With the help of the results obtained from ZDOCK and RDOCK programmes, top six possible interacting MAPK proteins were predicted for each MAPKK. In order to assess the reliability of the computational prediction, yeast two-hybrid (Y2H) analyses were performed using rice MAPKKs and MAPKs. A direct comparison of Y2H assay and computational prediction of protein interaction was made. With the exception of one, all the other MAPKK-MAPK pairs identified by Y2H screens were among the top predictions by computational dockings. Although, not all the predicted interacting partners could show interaction in Y2H, yet, the harmony between the two approaches suggests that the computational predictions in the present work are reliable. Moreover, the present Y2H analyses per se provide interaction network among MAPKKs and MAPKs which would shed more light on MAPK signalling network in rice.
  • Thumbnail Image
    Item
    Signal convergence through the lenses of MAP kinases: paradigms of stress and hormone signaling in plants
    (Springer, 2013) Kumar, Kundan; Wankhede, Dhammaprakash Pandhari; Sinha, Alok Krishna
    Common mechanisms plants use to translate the external stimuli into cellular responses are the activation of mitogen-activated protein kinase (MAPK) cascade. These MAPK cascades are highly conserved in eukaryotes and consist of three subsequently acting protein kinases, MAP kinase kinase kinase (MAPKKK), MAP kinase kinase (MAPKK) and MAP kinase (MAPK) which are linked in various ways with upstream receptors and downstream targets. Plant MAPK cascades regulate numerous processes, including various environmental stresses, hormones, cell division and developmental processes. The number of MAPKKs in Arabidopsis and rice is almost half the number of MAPKs pointing important role of MAPKKs in integrating signals from several MAPKKKs and transducing signals to various MAPKs. The cross talks between different signal transduction pathways are concentrated at the level of MAPKK in the MAPK cascade. Here we discussed the insights into MAPKK mediated response to environmental stresses and in plant growth and development.
  • Thumbnail Image
    Item
    Over expression of constitutively active mitogen activated protein kinase kinase 6 enhances tolerance to salt stress in rice
    (Springer, 2013) Kumar, Kundan; Sinha, Alok Krishna
    Salinity is one of the most common abiotic stresses encountered by plants in the environment and transgenic approaches offer new opportunities to improve tolerance. The mitogen activated protein kinase (MAPK) kinase (MKK) is a key component of MAPK cascade that plays important roles in intra and extra cellular signaling in plants. In the present study, a MKK from rice (Oryza sativa), OsMKK6 was functionally characterized in salt stress by transforming its constitutively active form.
  • Thumbnail Image
    Item
    Tomato mitogen activated protein kinases regulate the expression of extracellular invertase Lin6 in response to stress related stimuli
    (CSIRO Publishing, 2009) Hyun, Tae Kyung; Hoffmann, Anja; Sinha, Alok Krishna; Roitsch, Thomas
    Activation of mitogen-activated protein kinases (MAPKs) is a common reaction of plant cells in defence-related signal transduction pathways. Since the downstream events after the activation of MAPKs are largely unknown in plants, the role of MAPKs in the coordinate regulation of defence reactions and primary carbon metabolism by stress related stimuli has been analysed in tomato (Lycopersicon peruvianum Mill.). Thus, the relationship between MAPK, LpMPK2 and LpMPK3 and extracellular invertase Lin6, as the key enzyme of an apoplasmic phloem unloading pathway, has been analysed. It was observed that the mRNAs of LpMPK3 and Lin6 are sequentially induced by the same set of stress related stimuli, wounding, a fungal elicitor derived from Fusarium oxysporum lycopersici, the endogenous plant derived elicitor PGA and salt stress, while LpMPK2 transcripts are constitutively expressed. In a gain of function approach, a His-tagged version of LpMPK2 and a HA-tagged version of LpMPK3 were transiently and functionally expressed in leaves of transgenic tobacco (Nicotiana tabacum L.) plants expressing the β-glucuronidase reporter gene under control of the Lin6 promoter via agro-infection. The induction of the Lin6 promoter, as revealed by an increase in β-glucuronidase activity after 24 h, was dependent both on the expression and activation of both LpMPK2 and LpMPK3. These data suggest that the induction of extracellular invertase Lin6 by stress-related stimuli requires LpMPK2 and LpMPK3, and thus demonstrate that MAPK signalling might be involved in the regulation of primary carbon metabolism in general and sink metabolism in particular.