Institutional Publications
Permanent URI for this collectionhttps://ndkr-library.nipgr.ac.in/handle/123456789/11
Browse
8 results
Search Results
Item Whispering through the leaves: elucidating the mechanical perception and downstream defence response against herbivory(John Wiley & Sons, 2026) Vero, Khrade; Meena, Mukesh KumarInsect herbivory generates not only tissue loss but also a suite of biophysical and chemical cues that plants must detect and interpret. To cope with these challenges, plants have evolved specialised structures and molecular mechanisms that perceive mechanical inputs and translate them into coordinated defence responses. This review summarises the concept of mechanostimulation during insect feeding, with a focus on how plants recognise mechanical cues and integrate them into broader defence signalling networks. We outline the types of stimuli generated during herbivory, the morphological and molecular sensors involved in mechanoperception, and the electrical signalling processes that mediate intra- and inter-cellular communication of long-distance signal transmission, for which the vascular system, particularly the phloem and xylem, emerges as a critical conduit. We further discuss how mechanostimulation interfaces with hormonal pathways and transcriptional regulation, ultimately activating defence genes. This framework is further extended to non-vascular plants such as bryophytes, where mechanosensing and defence occur in the absence of vascular tissues, shedding light on how these strategies originated and evolved in early land plants. Collectively, these insights provide a comprehensive framework for understanding how mechanostimulation shapes plant defence and offers avenues for future research in enhancing crop resilience.Item Understanding the role of phytohormones in governing heat, cold, and freezing stress response(Elsevier B.V., 2023) Sharma, Mohan; Saksena, Harshita B.; Botta, Halidev Krishna; Laxmi, AshveryaPlants are exposed to rapid fluctuations in the environmental temperature and respond differently to temperature stress through fine-tuning genetic, biochemical, and physiological changes. Plants utilize several signaling pathways including stress and phytohormone signalings to cope with high and low temperature stresses. Emerging studies have documented the role of growth and development related phytohormones, such as auxin, cytokinin, brassinosteroids, gibberellic acid, and strigolactones, in temperature stress responses. Apart from functioning in biotic stress, salicylic acid and jasmonic acid participate in alleviating temperature stress. Abscisic acid and ethylene have also been reported to be major players in regulating abiotic stresses. Changes in global temperature in recent years have drastically affected the crop productivity. Therefore manipulation of certain factors in the stress and phytohormone signaling pathways can lead to the development of crops tolerant to severe temperature stresses, thereby minimizing yield loss during harsh climatic conditions. In this chapter, we shed light on how different hormone signaling pathways facilitate plants to adapt under stressful temperatures, thereby providing them with better stress resilience and survival potential.Item Sub-functionalization in rice gene families with regulatory roles in abiotic stress responses(Taylor & Francis Group, 2017) Sharma, G.; Giri, Jitender; Tyagi, Akhilesh K.Plants have developed intricate mechanisms to overcome abiotic stresses. The process of signal perception and activation of signaling cascades involves a large number of factors and molecules belonging to diverse classes of gene families. In comparison to animals, plants harbor larger multigene families along with the occurrence of plant-specific ones. Gene families with abiotic-stress-responsive members were analyzed and categorized into classes such as transcription factors, signal transduction components, transporters, epigenetic regulators, and other regulatory components. The number of members, phylogeny, family expansion, domain composition, subcellular localization, and expression profiling during varied abiotic stresses have been summarized. Candidate genes from families, functionally characterized for abiotic stress responses, have been described. Based on our compilation, the expansion of abiotic-stress-responsive gene families in rice has occurred via segmental and tandem duplication events to accommodate sub-functionalization needed for regulating diverse abiotic stress responses at expression, localization, and functional levels. The information documented here can be further utilized as a primer for selecting candidate genes for improvement of rice yield under abiotic stresses.Item Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice(John Wiley & Sons, 2014) Singh, Amarjeet; Kanwar, Poonam; Yadav, Akhilesh K.; Mishra, Manali; Jha, Saroj K.; Baranwal, Vinay; Pandey, Amita; Kapoor, Sanjay; Tyagi, Akhilesh K.; Pandey, Girdhar K.Ca²⁺ homeostasis is required to maintain a delicate balance of cytosolic Ca²⁺ during normal and adverse growth conditions. Various Ca²⁺ transporters actively participate to maintain this delicate balance especially during abiotic stresses and developmental events in plants. In this study, we present a genome-wide account, detailing expression profiles, subcellular localization and functional analysis of rice Ca²⁺ transport elements. Exhaustive in silico data mining and analysis resulted in the identification of 81 Ca²⁺ transport element genes, which belong to various groups such as Ca²⁺-ATPases (pumps), exchangers, channels, glutamate receptor homologs and annexins. Phylogenetic analysis revealed that different Ca²⁺ transporters are evolutionarily conserved across different plant species. Comprehensive expression analysis by gene chip microarray and quantitative RT-PCR revealed that a substantial proportion of Ca²⁺ transporter genes were expressed differentially under abiotic stresses (salt, cold and drought) and reproductive developmental stages (panicle and seed) in rice. These findings suggest a possible role of rice Ca²⁺ transporters in abiotic stress and development triggered signaling pathways. Subcellular localization of Ca²⁺ transporters from different groups in Nicotiana benthamiana revealed their variable localization to different compartments, which could be their possible sites of action. Complementation of Ca²⁺ transport activity of K616 yeast mutant by Ca²⁺-ATPase OsACA7 and involvement in salt tolerance verified its functional behavior. This study will encourage detailed characterization of potential candidate Ca²⁺ transporters for their functional role in planta.Item Comprehensive expression analysis of rice Armadillo gene family during abiotic stress and development(Oxford University Press, 2014) Sharma, Manisha; Singh, Amarjeet; Shankar, Alka; Pandey, Amita; Baranwal, Vinay; Kapoor, Sanjay; Tyagi, Akhilesh K.; Pandey, Girdhar K.Genes in the Armadillo (ARM)-repeat superfamily encode proteins with a range of developmental and physiological processes in unicellular and multicellular eukaryotes. These 42 amino acid, long tandem repeat-containing proteins have been abundantly recognized in many plant species. Previous studies have confirmed that Armadillo proteins constitute a multigene family in Arabidopsis. In this study, we performed a computational analysis in the rice genome (Oryza sativa L. subsp. japonica), and identified 158 genes of Armadillo superfamily. Phylogenetic study classified them into several arbitrary groups based on a varying number of non-conserved ARM repeats and accessory domain(s) associated with them. An in-depth analysis of gene expression through microarray and Q-PCR revealed a number of ARM proteins expressing differentially in abiotic stresses and developmental conditions, suggesting a potential roles of this superfamily in development and stress signalling. Comparative phylogenetic analysis between Arabidopsis and rice Armadillo genes revealed a high degree of evolutionary conservation between the orthologues in two plant species. The non-synonymous and synonymous substitutions per site ratios (Ka/Ks) of duplicated gene pairs indicate a purifying selection. This genome-wide identification and expression analysis provides a basis for further functional analysis of Armadillo genes under abiotic stress and reproductive developmental condition in the plant lineage.Item Mitogen-activated protein kinase signaling in plant under abiotic stress(Landes Bioscience, 2011) Sinha, Alok Krishna; Jaggi, Monika; Raghuram, Badmi; Tuteja, NarendraMitogen-activated protein kinase cascade is evolutionarily conserved signal transduction module involved in transducing extracellular signals to the nucleus for appropriate cellular adjustment. This cascade consists essentially of three components, a MAPK kinase kinase (MAPKKK), a MAPK kinase (MAPKK) and a MAPK connected to each other by the event of phosphorylation. These kinases play various roles in intra- and extra-cellular signaling in plants by transferring the information from sensors to responses. Signaling through MAP kinase cascade can lead to cellular responses including cell division, differentiation as well as responses to various stresses. MAPK signaling has also been associated with hormonal responses. In plants, MAP kinases are represented by multigene families and are involved in efficient transmission of specific stimuli and also involved in the regulation of the antioxidant defense system in response to stress signaling. In the current review we summarize and investigate the participation of MAPKs as possible mediators of various abiotic stresses in plants.Item Stress induced beta subunit of heterotrimeric G-proteins from Pisum sativum interacts with mitogen activated protein kinase(Landes Bioscience, 2011) Bhardwaj, Deepak; Sheikh, Arsheed Hussain; Sinha, Alok Krishna; Tuteja, NarendraWe here report in Pisum sativum system a novel protein-protein interaction of β-subunit of heterotrimeric G-proteins (PsGβ) with a Mitogen activated protein kinase (PsMPK3) during cDNA library screening by yeast-two-hybrid assay. The transcript of these two genes also showed co-regulation under abscisic acid (ABA) and methyl jasmonate (MeJA) treatments. The protein-protein interaction was further validated by performing one-to-one interaction and β-galactosidase assay in yeast system. β-subunit of G-proteins from a heterologous system Oryzae sativa also showed interaction with PsMPK3. The interaction between PsGβ and PsMPK3 was further confirmed by in vitro protein-protein interaction. This suggested that MPK3 function as effector molecule for Gβ, which may helps in the regulation of stomatal functioning. These findings also provide an evidence for a possible cross-talk between MPK3 and G-protein-mediated signaling pathways in plants.Item Rhythmic expression of mitogen activated protein kinase activity in rice(Springer, 2009) Rao, Kudupudi Prabhakara; Vani, Gubbala; Kumar, Kundan; Sinha, Alok KrishnaMitogen activated protein kinase (MAPK) are known to get activated during various stress signals and transduce the message from the cell membrane to the nucleus for appropriate cellular reorganization. Though, a certain basal activity of MAPK is often observed in the control plants. Prolonged exposure of rice plants to lowered or elevated temperature exhibited a rhythm in the activation of MAPKs. We analyzed existence of a possible endogenous rhythm in the activity of MAPKs in rice plants. The plants growing at constant temperature entrained in 16/8 h day-night cycle showed diurnal rhythm in activity. When the activation of MAPK was tested under continuous conditions by shifting plants to continuous darkness for a period of 72 h, the periodic rhythm persisted and followed a circadian pattern. Analysis of the transcripts of group A, B and C members of MAPKs under above conditions by quantitative real time PCR revealed that the members of group C exhibit periodic rhythm. Our data indicates that the MAP kinase activity in rice follows rhythmic expression in a circadian manner.